Amazon Reconciliation

Did Amazon Pay You Correctly? Find the gaps with Taxilla's Amazon Reconciliation Software.

Amazon settlements combine orders, refunds, fees, reimbursements, and reserves - manual tracking misses revenue leakage. Taxilla reconciles every order with fee validation for full cash flow visibility.

  • For FBA & FBM Sellers
  • Multi-currency Support
  • 100% Audit Ready

What is Amazon Reconciliation Software?

Amazon Reconciliation Software automatically verifies that every transaction recorded in Amazon Seller Central matches what happened financially. Instead of manually downloading reports and comparing spreadsheets, the software continuously reconciles orders, shipments, returns, refunds, settlements, invoices, bank credits, reimbursements, and fees to identify discrepancies before they impact your revenue or financial reporting. Think of it as a complete Amazon seller accounting software.

It closes the gap between what Amazon says it paid you and what actually landed in your bank account.

For Amazon sellers and finance teams, this means spotting revenue leaks early, cleaner books, and confidence that what you sold and got charged for is exactly what you got paid.

  • Amazon FBA Reconciliation
  • Amazon FBM Reconciliation
  • Amazon Settlement Fee Validation

Why Amazon Reconciliation Fails Without Automation

Most Amazon sellers don't realize they're being underpaid until they run the numbers. By then, the window to dispute is often closed.

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01

Scattered, Inconsistent Data

Orders, returns, settlement reports, bank statements arrive in different formats - Excel, CSV, PDF - on different schedules, with no common structure.

02

Settlement Mismatches

Amazon payouts rarely match expected revenue. Commissions, logistics fees, closing fees, and other deductions are bundled together with little transparency.

03

Untracked Returns

RTO shipments, customer returns, and refunds pile up without being matched back to the original order or credited correctly.

04

Delayed Closure

Finance teams wait days for Amazon payment reconciliation data before they can close invoices, post credit notes, or finalize their books - delaying month-end close.

05

Unchecked Fees

Amazon commission and fee structures are subject to change. Without validation, overcharges go undetected and unrecovered.

06

Reserve Adjustments

Reserve balances and adjustments make it harder to tie settlement numbers to what actually lands in the bank account.

Manual vs. Automated Amazon Settlement Reconciliation

Process Area Manual Reconciliation Taxilla's Amazon Reconciliation Software
Data Collection Downloaded separately from Amazon Seller Central, OMS, ERP, bank feeds Auto-import via API and file feeds from all systems
Matching Manual VLOOKUPs across spreadsheets Rule-based, AI-assisted line-item matching
Fee Validation Often skipped Every fee and deduction validated automatically
Returns Handling Hard to trace, often missed Matched automatically to the original order
Turnaround Time Days to weeks per cycle Near real-time, continuous reconciliation
Scalability Breaks down as order volume grows Scales to millions of transactions
FBA + FBM View Reconciled separately, no combined view Unified view of FBA and FBM numbers

One Solution for Amazon Reconciliation, Fee Validation & ERP Book Closure

Taxilla's Amazon Reconciliation Software validates entire order life cycle.
Orders Placed ↔ Orders Fulfilled/Cancelled/Returned ↔ Invoices ↔ Amazon Settlements ↔ Bank Deposit
Whether you run FBA, FBM, or both, you get a unified view of your entire Amazon business on a single platform.

Marketplace Orders

Amazon Orders

Every order tracked to fulfilment and settlement

Returns & Cancellations

Returns & Cancellations

Each cancellation or return traced back to its original order

Orders Fulfilled

Orders Fulfilled

Fulfilled orders matched with Amazon orders and ERP invoices

Payment Settlements

Amazon Payment Settlements

Compare expected vs actual payouts to find missing, or partial payments

Payment Settlements

Refunds

Verify each refund against returned orders

Payment Settlements

Invoices

Each invoice matched to the fulfilled order

Payment Settlements

Credit Notes

Each credit note matched with returned order

Payment Settlements

Bank Statement

Bank credits verified against settlements

Fees and Commissions

Fees and Commissions

Fee, commissions, deductions verified against rate cards

6 Discrepancies Taxilla's Amazon Reconciliation Software Detects Automatically

Missing Settlements & Short-Payments
Return & Refund mismatches
Orders not fulfilled
Missing & incorrect invoices
Bank payment not received
Overcharged Amazon fees & deductions

For every mismatch, your finance team can immediately see:

Which order caused the discrepancy
Which settlement/refund was affected
Which fee created the difference
Which reimbursement is still pending
Which bank deposit is missing
Which ERP entry needs correction

Instead of spending hours investigating exceptions, your team receives complete transaction-level visibility with an audit trail for every reconciliation.

Marketplace Order Fulfilment Reconciliation
01

Amazon Order Fulfilment Reconciliation

  • Amazon Orders ↔ Orders Fulfilled (OMS)
Marketplace Payment Reconciliation
02

Amazon Payment Reconciliation

  • Amazon Orders ↔ Returns & Cancellations
  • Amazon Orders ↔ Settlement Report
Marketplace Settlement to Bank Reconciliation
03

Amazon Settlement to Bank Reconciliation

  • Amazon Settlement Report ↔ Bank Statement
Marketplace Settlement Fee Validation
04

Amazon Settlement Fee Validation

  • Validate Amazon marketplace fees, commissions, closing fee, logistics charges, shipping fees, and other deductions against contracted rate cards
ERP Invoice & Credit Notes Reconciliation
05

ERP Invoice Reconciliation

  • Invoice ↔ Orders Fulfilled
  • Returns ↔ Credit Notes
ERP Book Closure
06

ERP Book Closure

  • Post reconciled entries directly to ERP GL/Sub-GL for invoice clearing and book closure

How Amazon Reconciliation Works - 3 Steps to a Single Source of Financial Truth

STEP 01

Integrate & Connect

Connect your Amazon Seller Central account, OMS, ERP, rate cards, and bank feeds via pre-built API connectors or file-based integrations. No IT team required. This step eliminates the file for any manual data preparation or file formatting. Taxilla automatically standardizes your data.

STEP 02

Transaction Matching & Clearance

The engine ingests Amazon orders, fulfilled orders in OMS, ERP invoices and credit notes, Amazon settlement reports, and bank statements - then matches every line item using configurable rules. Each Amazon fee/ deduction is matched with an expected deduction a/c rate cards to identify revenue leakage.

STEP 03

Close & Report

View audit-ready reconciliation reports and summaries to give you a line-item level view of each order, get real-time snapshots through dashboards for CFO-level visibility, and close your books in days - not weeks.

Turn Amazon Reconciliation Into a Profitability Engine

1-3%

Revenue Recovery

3x

Faster Close

95%+

Match Accuracy

All

Multi-Marketplace Visibility

100%

Audit Trail Trail

Built to Scale

Estimate Your Annual Savings with Taxilla

See how much you can save by automating marketplace reconciliation and recovering lost revenue.

YOUR INPUTS

Finance team size (FTEs)* 5
150
Annual cost per employee (USD)* $50,000
$10K$10K
Annual order volume* 725,000
25K15M
Average order value (USD)*

Average order value is required and must be greater than zero.

ANNUAL GMV

USD 36.3M

Gross Merchandise Value processed per year

ESTIMATED NET ANNUAL SAVINGS

USD 537.5K - 1.3M

FTE cost saved + revenue recovered

PAYBACK PERIOD

4.0 Days

Time to recover your Taxilla investment

*Estimates based on industry benchmarks. Actuals may vary as per your current process.

Fits Into Your Existing Tech Stack

Taxilla doesn't replace your systems - it connects them. Integrate via API, SFTP, or file upload with:

Marketplaces

Marketplaces

ERPs

ERPs

OMS

OMS

Banks

Banks

Amazon Reconciliation Software Pricing

Pricing scales with your Amazon order volume. Choose the plan that best fits your business.

Start with a Free 7-Day Trial

Evaluate your data with a 7-day free trial of the Amazon Payment Reconciliation module. Upgrade to a paid plan to unlock the complete reconciliation suite and additional modules.

Parameter Growth Scale Professional Enterprise
Monthly Orders 5,000 20,000 80,000 Custom
Dashboard Users 1 2 3 Custom
Orders vs. Orders Fulfilled (OMS) Y Y Y Y
Orders vs. Returns & Cancellations Y Y Y Y
Orders vs. Settlement Report Y Y Y Y
Settlement Report vs. Bank Statement Y Y Y Y
Settlement Fee Validation Y Y Y Y
ADD-ONS
Invoice vs. Orders Fulfilled N Y Y Y
Returns vs. Credit Notes N Y Y Y
ERP Posting N Y Y Y
Support Plans
Standard Support Included in all tier
Priority Support Additional 15% of subscription fee
Premier Support Additional 22.5% of subscription fee

* All plans are billed annually, with pricing shown above as the equivalent monthly price.

Resources

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Amazon Settlement Reports Explained for 2026: What Every Seller Must Know

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Frequently asked questions

How does Taxilla's Amazon Reconciliation Software help my business?
It helps you recover lost revenue by detecting short payments, overcharged Amazon fees, and missing reimbursements, while giving you complete financial visibility and faster, more accurate book closure.
Can Taxilla validate Amazon fees and commissions?
Yes. Taxilla validates FBA fees, commissions, and logistics charges against your contracted rates to flag overbilling and recover leaked revenue.
How does Amazon reconciliation connect to ERP book closure?
Taxilla automatically posts reconciled entries to your ERP's general ledger, clearing open items and enabling faster month-end close.
How does Taxilla handle returns and RTOs?
Returns and RTOs are automatically matched back to the original order and reconciled against credit notes and settlement adjustments.
How long does implementation take?
Most sellers go live within 1 to 2 weeks, using pre-built marketplace and ERP connectors alongside file-based integration options.
Can I start with Amazon and add more marketplaces later?
Absolutely. You can onboard one marketplace at a time and expand coverage as your business grows, without re-implementing the platform.
Can Taxilla handles transaction volume in millions?
Absolutely. Taxilla’s Amazon Reconciliation solution is designed to scale automatically as the volume grows, without any impact in performance.
What will happen if my order volume exceeds the selected tier?
You can seamlessly upgrade to a higher plan as your Amazon business grows and your reconciliation continues uninterrupted.

Protect Every Dollar You Earn with Automated Amazon Reconciliation.

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